Find all distances to next neighbour of all classes for folders

Find all distances to next neighbour of all classes for folders

Usage

nearestClassDistances.folder(
  path,
  N = 7,
  voxelsize = NULL,
  add = FALSE,
  cores = 1
)

Arguments

path

path to folder

N

number of classes, default: 7

voxelsize

real size of voxels (in microns), if NULL (default), look in folder XYZmic

add

if TRUE, only process images which have not been processed before (i.e. have been added to classN)

cores

number of cores to use in parallel (needs parallel package if cores>1)

Value

nothing, results are in folder distances in RData format