Description and instructions

  • Volker J. Schmid, Marion Cremer, Thomas Cremer: Quantitative analyses of the 3D nuclear landscape recorded with super-resolved fluorescence microscopy. Methods 123 (2017) 33-46. [DOI]

Publications using nucim (including pre-releases)

  • Cremer, M., Schmid, V.J., Kraus, F., Markaki, Y., Hellmann, I., Maiser, A., Leonhardt, H., John, S., Stamatoyannopoulos, J. and Cremer, T.: Initial high-resolution microscopic mapping of active and inactive regulatory sequences proves non-random 3D arrangements in chromatin domain clusters. Epigenetics & Chromatin 10:39 (2017). [DOI]
  • Popken J., Schmid V.J., Strauss, A., Guengoer, T., Wolf, E., Zakhartchenko, T.: Stage-dependent remodeling of the nuclear envelope and lamina during rabbit early embryonic development. Journal of Reproduction and Development 62:2 (2016) 127–135. [DOI]
  • Popken J., Graf A., Krebs S., Blum H., Schmid V.J., Strauss, A., Guengoer, T., Zakhartchenko, T., Wolf, E., Cremer, T.: Remodeling of the Nuclear Envelope and Lamina during Bovine Preimplantation Development and Its Functional Implications. PLoS One 10:5 (2015) e0124619. [DOI]
  • Popken, J., Brero, A., Koehler, D., Schmid, V.J., Strauss, A., Wuensch, A., Guengoer, T., Graf, A., Krebs, S., Blum, H., Zakhartchenko, V., Wolf, E., Cremer, T.: Reprogramming of fibroblast nuclei in cloned bovine embryos is paralleled by major structural remodeling with both striking similarities and differences to nuclear phenotypes of embryos fertilized in vitro. Nucleus 5:6 (2014) 555–589. [DOI]
  • Smeets, D., Markaki, Y., Schmid, V.J., Kraus, F., Tattermusch, A., Cerase, A., Sterr, M., Fiedler, S., Demmerle, J., Popken, J., Leonhardt, H., Brockdorff, N., Cremer, T., Schermelleh, L., Cremer, M.: Three-dimensional super-resolution microscopy of the inactive X chromosome territory reveals a collapse of its active nuclear compartment harboring distinct Xist RNA foci. Epigenetics & Chromatin 7:8 (2014). [DOI]