Usage
dapimask(
img,
size = NULL,
voxelsize = NULL,
thresh = "auto",
silent = TRUE,
cores = 1
)
Arguments
- img
DAPI channel image (3d)
- size
size of img in microns
- voxelsize
size of voxel in microns
- thresh
threshold for intensity. Can be "auto": function will try to find automatic threshold
- silent
Keep silent?
- cores
number of cores available for parallel computing
Value
mask image, array with same dimension as img.