Automatic DAPI mask segmentation for folder
Usage
dapimask.folder(
path,
folder = "blue",
voxelsize = NULL,
size = NULL,
cores = 1
)
Arguments
- path
path to folder with DAPI
- folder
folder with DAPI images
- voxelsize
real size of voxel (in microns), if NULL (default), look in folder XYZmic
- size
real size of image (in microns), if NULL (default), look in folder XYZmic
- cores
number of cores to use in parallel (need parallel package)
Value
nothing, results are in folder dapimask