Automatic DAPI mask segmentation for files
Usage
dapimask.file(
file,
folder = "blue",
voxelsize = NULL,
size = NULL,
silent = FALSE,
cores = 1
)
Arguments
- file
file to read
- folder
with
- voxelsize
real size of voxel (in microns), if NULL (default), look in folder XYZmic
- size
real size of image (in microns), if NULL (default), look in folder XYZmic
- silent
Keep silent?
- cores
Number of cores available for parallel computing
Value
nothing, DAPI mask image will be saved to dapimask/