bioimagetools is an R package for working with images in 3D and 4D, mostly for biology/microscopy.
The stable version is available on CRAN:
The development version is available on github:
setRepositories(ind=c(1,2)) install.packages(c("devtools","tiff","EBImage")) ::install_github("volkerschmid/bioimagetools")devtools
You may need to install additional libraries on your OS before you can install bioimagetools. E.g. on Ubuntu/Debian systems, please execute
-dev libcurl4-openssl-dev libtiff5-dev libfftw3-devsudo apt install libssl
in the terminal before installing bioimagetools.
This package is developed at the BioImaging group at the Department of Statistics, in cooperation with the Biocenter, Department of Biology II, both at LMU Munich.